Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015921671.1_cds_XP_016470591.1_63025
CDS Infomation

[gene=LOC107792854] [db_xref=GeneID:107792854] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016470591.1] [location=join(36137..37033,37471..38085)] [gbkey=CDS]
Sequence

ATGGAGATTCAGTTTTCTAACTTAGTTGCATTCTTGCTCTTTCTCTCCAGCATCTTTCTT
GTATTCAAAAAATGGAAAACCAGAAAACTAAATTTGCCTCCTGGTCCATGGAAATTACCT
TTTATTGGAAGTTTACACCATTTGGCTGTGGCAGGTCCACTTCCTCACCATGGCCTAAAA
AATTTAGCCAAACGCTATGGTCCTCTTATGCATTTACAACTTGGACAAATTCCTACACTC
ATCATATCATCACCTCAAATGGCAAAAGAAGTACTAAAAACTCACGACCTCGCTTTTGCC
ACTAGACCAAAGCTTGTCGTGGCCGACATCATTCACTACGACAGCACGGACATAGCATTT
TCGCCATACGGTGAATACTGGAGACAAATTCGTAAAATTTGCATATTGGAACTCTTGAGT
GCCAAGATGGTCAAGTTTTTTAGCTCGATTCGCCAAGATGAGCTCTCGAAGATGGTTTCA
TCTATACGAACGACGCCCAATCTTCCAGTCAATCTTACCGACAAGATTTTTTGGTTTACG
AGTTCGGTAATTTGTAGATCAGCTTTAGGGAAGATATGTGGTGACCAAGACAAATTGATC
ATTTTTATGAGGGAAATAATATCATTGGCAGGTGGATTTAGTATTGCTGATTTTTTCCCT
ACATGGAAAATGATTCATGATATTGATGGTTCAAAATCTAAACTGGTGAAGGCACATCGT
AAGATTGATGAAATTTTGGAAAATGTGGTAAATGAGCACAAACAGAATCGAGCAGATGGT
AAAAAGGGTAATGGTGAATTTGGTGGAGAAGATCTGATTGATGTTTTGTTAAGAGTTAGA
GAAAGTGGAGAAGTTCAAATTCCAATCACAGATGACAATATCAAATCAATATTAATCGAC
ATGTTCTCTGCCGGATCGGAAACATCATCGACAACTATAATTTGGGCATTAGCTGAAATG
ATGAAGAAACCAAGTGTTTTAGCAAAGGCACAAGCTGAAGTGAGGCAAGCTTTGAAGGGG
AAGAAAATTAGTTTTCAAGAGATTGATATTGATAAGCTAAAGTATTTGAAGTTAGTGATC
AAAGAAACTTTAAGAATGCACCCTCCAATTCCTCTGTTAGTCCCTAGAGAATGTATGGAA
GATACAAAGATTGATGGTTACAATATACCTTTCAAAACAAGAGTCATTGTTAATGCATGG
GCAATTGGACGAGATCCTCAAAGTTGGGATGATCCTGAAAGCTTTACGCCAGAGAGATTT
GAGAATAATTCTATTGATTTTCTTGGAAATCATCATCAATTTATTCCATTTGGTGCAGGA
AGAAGGATTTGTCCTGGAATGCTATTTGGTTTAGCTAATGTTGGACAACCTTTAGCTCAG
TTACTTTATCACTTCGATTGGAAACTCCCTAATGGACAAACTCACCAAAATTTCGACATG
ACTGAGTCACCTGGAATTTCTGCTACAAGAAAGGATGATCTTATTTTGATTGCCACTCCT
GCTCATTCTTGA

Peptide Sequence

PEP ID

XP_016470591.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MEIQFSNLVAFLLFLSSIFLVFKKWKTRKLNLPPGPWKLPFIGSLHHLAVAGPLPHHGLK
NLAKRYGPLMHLQLGQIPTLIISSPQMAKEVLKTHDLAFATRPKLVVADIIHYDSTDIAF
SPYGEYWRQIRKICILELLSAKMVKFFSSIRQDELSKMVSSIRTTPNLPVNLTDKIFWFT
SSVICRSALGKICGDQDKLIIFMREIISLAGGFSIADFFPTWKMIHDIDGSKSKLVKAHR
KIDEILENVVNEHKQNRADGKKGNGEFGGEDLIDVLLRVRESGEVQIPITDDNIKSILID
MFSAGSETSSTTIIWALAEMMKKPSVLAKAQAEVRQALKGKKISFQEIDIDKLKYLKLVI
KETLRMHPPIPLLVPRECMEDTKIDGYNIPFKTRVIVNAWAIGRDPQSWDDPESFTPERF
ENNSIDFLGNHHQFIPFGAGRRICPGMLFGLANVGQPLAQLLYHFDWKLPNGQTHQNFDM
TESPGISATRKDDLILIATPAHS

Transcript Sequence

Gene sequence data has not been registered.